Information for 21-CTAGACAAGAGT (Motif 19)

A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C G T A G T C A C G T C T G A A C T G
p-value:1e-3
log p-value:-7.062e+00
Information Content per bp:1.936
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif0.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background110.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTAGACAAGAGT
TCTAGACA-----
 A C G T A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

GATA6/MA1104.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTAGACAAGAGT
AAAAGATAAGAAA
 A C G T A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
C G T A C G T A T C G A G C T A T C A G C T G A C G A T C G T A C G T A T A C G T C G A C G T A C G T A

PB0023.1_Gata6_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTAGACAAGAGT--
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTAGACAAGAGT
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTAGACAAGAGT-----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTAGACAAGAGT
NVAGATAAGR--
 A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTAGACAAGAGT
-NAGATAAGNN-
 A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTAGACAAGAGT
-CAGATAAGGN-
 A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTAGACAAGAGT
ANAGATAAGAA-
 A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

GATA2/MA0036.3/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTAGACAAGAGT
NNAGATAAGNN-
 A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A A C G T