Information for 8-GGCCTCAAAGCG (Motif 3)

A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G C T A C G T A C G T A T C G C G T A A C T G A C T G A G T C G T A C
p-value:1e-16
log p-value:-3.697e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif16.13%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.0 +/- 61.3bp
Average Position of motif in Background44.4 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCCTCAAAGCG
-ACATCAAAGG-
 A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCAAAGCG-
AAAGATCAAAGGAA
 A C G T A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCCTCAAAGCG
-ASATCAAAGG-
 A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G
A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCCTCAAAGCG
-ACWTCAAAGG-
 A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCCTCAAAGCG
--ACTGAAACCA
 A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTCAAAGCG
VSCACATCAAAG--
 A C G T A C G T A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTCAAAGCG---
NNNAGATCAAAGGANNN
 A C G T A C G T A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCCTCAAAGCG---
TATAGATCAAAGGAAAA
 A C G T A C G T A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCAAAGCG
CGGTTTCAAA---
 A C G T A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTCAAAGCG---
NANAGATCAAAGGGNNN
 A C G T A C G T A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T