Information for 9-TGTGTTCAACTC (Motif 4)

C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C C G T A
p-value:1e-14
log p-value:-3.351e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif16.13%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets82.7 +/- 57.4bp
Average Position of motif in Background112.8 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGTGTTCAACTC-
-----TGAACTCA
 C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

MYB/MA0100.3/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTGTTCAACTC--
----ACCAACTGTC
 C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGTGTTCAACTC
--NATTCAAAT-
 C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGTGTTCAACTC
CCATTGTATGCAAAT-
 A C G T A C G T A C G T A C G T C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGTGTTCAACTC-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGTGTTCAACTC
--TATGCAAATC
 C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C
A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGTGTTCAACTC----
NNAGTCCCACTCNNNN
 C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGTGTTCAACTC--
----TTGAMCTTTG
 C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGTGTTCAACTC--------
-----TTAACCCTTTVNKKN
 C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGTGTTCAACTC---
TTGTATGCAAATTAGA
 A C G T C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A