Information for 12-GAAACACTCTTT (Motif 7)

A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A A C T G C G T A A T C G C G A T A C T G A C G T A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif16.13%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets117.2 +/- 42.2bp
Average Position of motif in Background101.9 +/- 49.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAACACTCTTT-
TWGHWACAWTGTWDC
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAAACACTCTTT-
YDGHTACAWTGTADC
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAAACACTCTTT
ACTGAAACCA-----
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAACACTCTTT
-NAACAAT----
 A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAACACTCTTT--
AAGAACATWHTGTTC
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAACACTCTTT
GTAAACAG-----
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAACACTCTTT--
VAGRACAKNCTGTBC
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAACACTCTTT--
VAGRACAKWCTGTYC
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAAACACTCTTT----
AGNACAGNCTGTTCTN
 A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAAACACTCTTT
-MRSCACTYAA-
 A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T