Information for 14-CTGTAGGCAGAG (Motif 13)

A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T A G T C A C G T A C T G A G T C A G T C A C G T C T G A A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.920
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.6 +/- 36.1bp
Average Position of motif in Background124.5 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGTAGGCAGAG-
-RGKGGGCGGAGC
 A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C G T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTAGGCAGAG
-TNNGGGCAG--
 A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGTAGGCAGAG
CACAGCAGGGGG--
 A C G T A C G T A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTAGGCAGAG
-GGTTGGCAT--
 A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CTGTAGGCAGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGTAGGCAGAG
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGTAGGCAGAG
-NNTTGGCANN-
 A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGTAGGCAGAG
DCTCAGCAGG-----
 A C G T A C G T A C G T A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGTAGGCAGAG
-NGTGGGCAT--
 A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTGTAGGCAGAG
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A G C T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C T G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T