Information for 16-AATATGTATTTG (Motif 16)

C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
Reverse Opposite:
G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T
p-value:1e-7
log p-value:-1.731e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.26%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets136.4 +/- 42.2bp
Average Position of motif in Background84.0 +/- 66.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATATGTATTTG
GAATATTCAT---
 A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATATGTATTTG
GHATATKCAT---
 A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AATATGTATTTG
ANTTNTACATGTANTTN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AATATGTATTTG
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AATATGTATTTG
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATATGTATTTG----
-AYATGYATATGCATR
 C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

ONECUT1/MA0679.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AATATGTATTTG--
ANTATCGATTTTTN
 C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATATGTATTTG
GAATGTTTGTTT-
 A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AATATGTATTTG
ATGAATATTCATGAG
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATATGTATTTG
TTCATTTGCATAT-
 A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A G C T A C G T A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T