Information for 18-GGGCTTTGTG (Motif 17)

A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C G T A C A G T C
p-value:1e-6
log p-value:-1.554e+01
Information Content per bp:1.907
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.26%
Number of Background Sequences with motif39.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets101.2 +/- 50.2bp
Average Position of motif in Background90.5 +/- 77.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GGGCTTTGTG--
-NNCTTTGTTNN
 A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GGGCTTTGTG--
--CCWTTGTYYB
 A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGGCTTTGTG
AGGVNCCTTTGT-
 A C G T A C G T A C G T A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGGCTTTGTG
--CCWTTGTY
 A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGGCTTTGTG--
--YCTTTGTTCC
 A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGCTTTGTG--
--CCATTGTTNY
 A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGCTTTGTG--
--CCTTTGTTTT
 A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGCTTTGTG
--CCTTTGTT
 A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTTTGTG----
NNNCCATTGTGTNAN
 A C G T A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTTTGTG-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C T G A C T G C T A G A G T C C G A T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T