Information for 7-CGWTGATT (Motif 7)

A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T
Reverse Opposite:
G T C A G T C A C A G T A T G C C G T A G C A T A G T C T C A G
p-value:1e-14
log p-value:-3.418e+01
Information Content per bp:1.722
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif41.03%
Number of Background Sequences with motif852.7
Percentage of Background Sequences with motif2.68%
Average Position of motif in Targets104.1 +/- 61.5bp
Average Position of motif in Background100.0 +/- 104.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CGWTGATT--
--TTGATTGN
 A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CGWTGATT------
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGWTGATT-------
TNNNATGATTTCNNCNN
 A C G T A C G T A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

NR1H4/MA1110.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGWTGATT--
NAGGTCATTGA
 A C G T A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGWTGATT--
CNGTGATTTN
 A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGWTGATT--
NNTGTGGATTSS
 A C G T A C G T A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

EN2/MA0642.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGWTGATT---
-GNTAATTGGN
 A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T A C G T
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

ESX1/MA0644.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGWTGATT---
-GNTAATTGGN
 A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T A C G T
A C G T C A T G A G C T C G A T C T G A C T G A C A G T A G C T C T A G C T A G A G C T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGWTGATT------
--RTGATTKATRGN
 A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

PH0017.1_Cux1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGWTGATT----
TAATGATGATCACTA
 A C G T A C G T A C G T A G T C A C T G C G T A A C G T T A C G G T C A A C G T C A G T A C G T A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A