Information for 16-CCTGTCCAATRC (Motif 10)

A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
Reverse Opposite:
A C T G G A T C C G T A C G A T A C G T A C T G A C T G G T C A G T A C C G T A C T A G A C T G
p-value:1e-14
log p-value:-3.238e+01
Information Content per bp:1.792
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif16.22%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets90.8 +/- 50.0bp
Average Position of motif in Background106.6 +/- 78.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTGTCCAATRC
GCTGTCAA----
 A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCAATRC
AAGCACCTGTCAATAT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCAATRC
AAAGACCTGTCAATAC-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTGTCCAATRC
CCTGTCAA----
 A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTGTCCAATRC
ACTAGCCAATCA
 A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCAATRC
AATTACCTGTCAATAC-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCAATRC
AAAGACCTGTCAATCC-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCTGTCCAATRC-
---AGCCAATCGG
 A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCAATRC
AACGAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCTGTCCAATRC-
ACCGTGACTAATTNN
 A C G T A C G T A G T C A G T C C G A T A C T G A C G T A G T C G T A C C G T A C G T A A C G T C T A G A G T C A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A