Information for 17-CCCTGTAGGCAG (Motif 11)

A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C A C G T C T G A A G T C C G T A A C T G C T A G C T A G
p-value:1e-13
log p-value:-3.210e+01
Information Content per bp:1.935
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.6 +/- 58.2bp
Average Position of motif in Background82.2 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)2.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCTGTAGGCAG
TGCCCTGAGGGCA-
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCTGTAGGCAG
TGCCCTGAGGGCA-
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCTGTAGGCAG
TGCCCTGAGGGCA-
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTGTAGGCAG
TCACCTCTGGGCAG
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCTGTAGGCAG
TGCCCCAGGGCA-
 A C G T A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCTGTAGGCAG
TGCCCCAGGGCA-
 A C G T A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCTGTAGGCAG
TGCCCCCGGGCA-
 A C G T A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCCTGTAGGCAG
---TNNGGGCAG
 A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTGTAGGCAG
TTGCCCTAGGGCAT
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCTGTAGGCAG
CACAGCAGGGGG
 A G T C A G T C A G T C A C G T A C T G A G C T C G T A A C T G A C T G A G T C C G T A C T A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G