Information for 18-TATACTGCACAT (Motif 12)

A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T T C A G A G T C C T G A A T C G A C G T C G T A A C G T C G T A
p-value:1e-13
log p-value:-3.210e+01
Information Content per bp:1.957
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.1 +/- 55.3bp
Average Position of motif in Background74.3 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TATACTGCACAT----
AACACTGCACATTGTT
 A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TATACTGCACAT----
CAGATGTGCACATACGT
 A C G T A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TATACTGCACAT--
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TATACTGCACAT----
TACATGTGCACATAAAA
 A C G T A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TATACTGCACAT
CATTGTTATGCAAAT
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TATACTGCACAT
TCCAATCCACA-
 A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TATACTGCACAT
CTTTGTTATGCAAAT
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

HIF1A/MA1106.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TATACTGCACAT--
----NNGCACGTNC
 A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

POU5F1/MA1115.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TATACTGCACAT-
--ATATGCAAATT
 A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T A C G T
A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TATACTGCACAT-
ANATTTTTGCAANTN
 A C G T A C G T A C G T C G T A A C G T C G T A A T G C A G C T A C T G A G T C C G T A A G T C G T C A A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G