Information for 15-RGCAAGTGGA (Motif 15)

C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A G T C C G A T A C G T A C T G G T A C G A T C
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.824
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif18.92%
Number of Background Sequences with motif131.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets79.6 +/- 43.4bp
Average Position of motif in Background99.5 +/- 86.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:RGCAAGTGGA
NTCAAGTGGN
 C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---RGCAAGTGGA---
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---RGCAAGTGGA---
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:RGCAAGTGGA
NTCAAGTGG-
 C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:RGCAAGTGGA
GTCACGTGGM
 C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

MYC/MA0147.3/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-RGCAAGTGGA-
NNGCACGTGGNN
 A C G T C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A A C G T
T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----RGCAAGTGGA---
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:RGCAAGTGGA-
-----GTGGAT
 C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---RGCAAGTGGA---
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---RGCAAGTGGA---
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T C T A G A C T G A G T C C G T A C G T A C T A G C G A T A C T G A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A