Information for 11-TGATCAGT (Motif 20)

A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C T G C G T A A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.061e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif309.1
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets102.6 +/- 60.9bp
Average Position of motif in Background107.9 +/- 87.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------TGATCAGT-
TAATGATGATCACTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCAGT----
TNAGNTGATCAACCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TGATCAGT---
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGATCAGT--
DGATCRATAN
 A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGATCAGT--
TAATCGATAA
 A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Lhx8/MA0705.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGATCAGT
CTAATTAG-
 A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T
A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGATCAGT
HNRAATCAAT
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGATCAGT--
TYTGACCASWRG
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGATCAGT
NBWGATAAGR
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

POL002.1_INR/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGATCAGT---
---TCAGTCTT
 A C G T A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T