Information for 12-GCTTTGTG (Motif 21)

A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A C G T A G T C A A C T G A G T C
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.81%
Number of Background Sequences with motif150.6
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets118.7 +/- 66.3bp
Average Position of motif in Background104.9 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTGTG--
NNCTTTGTTNN
 A C G T A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GCTTTGTG--
CCWTTGTYYB
 A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----GCTTTGTG
AGGVNCCTTTGT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTTTGTG
CCWTTGTY
 A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTTTGTG--
CCATTGTTNY
 A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTTTGTG--
YCTTTGTTCC
 A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCTTTGTG--
CCTTTGTTTT
 A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTGTG----
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTTTGTG
CCTTTGTT
 A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTGTG-----
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C T G A G T C C A G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T