Information for 24-CAAATACATATT (Motif 22)

G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C G T C T A G A C G T C G T A A C G T A G C T C G A T A C T G
p-value:1e-4
log p-value:-9.637e+00
Information Content per bp:1.923
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif380.6
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets82.0 +/- 48.9bp
Average Position of motif in Background95.7 +/- 70.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAAATACATATT-
---ATGAATATTC
 G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T A C G T
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAAATACATATT-
---ATGMATATDC
 G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAAATACATATT---
CTCATGAATATTCAT
 G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T A C G T A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAAATACATATT
AAAAAATCGATAAT
 A C G T A C G T G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAAATACATATT----
-AYATGYATATGCATR
 G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAAATACATATT-
-AAACAAACATTC
 G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAATACATATT-----
AAAATACATGTAAAAAT
 G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAATACATATT-----
TAAATACATGTAAAATT
 G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAATACATATT-----
AATATACATGTAAAATT
 G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

ONECUT2/MA0756.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAATACATATT
AAAAAATCGATAAT
 A C G T A C G T G T A C C G T A C T G A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G A T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T