Information for 25-TAAATAAATTTA (Motif 23)

A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A G T C A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A
p-value:1e-1
log p-value:-3.475e+00
Information Content per bp:1.948
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets87.3 +/- 52.7bp
Average Position of motif in Background127.7 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROP1/MA0715.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAAATAAATTTA
TAATTAAATTA-
 A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TAAATAAATTTA
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAAATAAATTTA
TAATTNAATTAA
 A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAAATAAATTTA----
NNNNTGAATTCANNNC
 A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

Lhx3/MA0135.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAAATAAATTTA
GATTAATTAATTT-
 A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TAAATAAATTTA
AAAAAGTAAACAAAGAC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TAAATAAATTTA
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PHOX2A/MA0713.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAAATAAATTTA
TAATTAAATTA-
 A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TAAATAAATTTA
AAAAAGTAAACAAACAC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TAAATAAATTTA
AAAAAGTAAACAAACAC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A C G T A C G T A A C G T A C G T A C G T C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T