Information for 11-GGGTACTTTGAT (Motif 4)

A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T
Reverse Opposite:
C G T A A C G T A T G C C G T A C G T A C G T A A C T G A C G T C G T A A G T C G A T C G T A C
p-value:1e-16
log p-value:-3.903e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.5 +/- 63.9bp
Average Position of motif in Background119.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGGTACTTTGAT-----
ATTTCCTTTGATCTATA
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGGTACTTTGAT-----
AATCCCTTTGATCTATC
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGGTACTTTGAT-----
NNTTCCTTTGATCTANA
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGGTACTTTGAT-----
NNTTCCTTTGATCTNNA
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GGGTACTTTGAT
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GGGTACTTTGAT--
----CCTTTGATST
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGGTACTTTGAT----
--TNCCTTTGATCTTN
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GGGTACTTTGAT-----
-----CTTTGATGTGSB
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GGGTACTTTGAT--
----CCTTTGATGT
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GGGTACTTTGAT
------TTTAAT
 A C T G C T A G A C T G A C G T C G T A G T A C A C G T A C G T A C G T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T