Information for 12-AGCCTAGACAAG (Motif 5)

C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G
Reverse Opposite:
G T A C A C G T C G A T A T C G A G C T A G T C C G A T C G T A C T A G A C T G G T A C A C G T
p-value:1e-16
log p-value:-3.903e+01
Information Content per bp:1.881
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.9 +/- 44.1bp
Average Position of motif in Background97.4 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGCCTAGACAAG
CGTCTAGACA--
 C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGCCTAGACAAG
--TCTAGACA--
 C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G
A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGCCTAGACAAG
---BCAGACWA-
 C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCCTAGACAAG----
-TCCCAGMCRAGCCCC
 C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCCTAGACAAG---
CAAATCCAGACATCACA
 A C G T A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

FOXF2/MA0030.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCCTAGACAAG
CAAACGTAAACAAT
 A C G T A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

GATA2/MA0036.3/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCCTAGACAAG--
---NNAGATAAGNN
 C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCCTAGACAAG-
---NVAGATAAGR
 C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTAGACAAG-
ATGCCCGGGCATGT
 A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGCCTAGACAAG
---CCAGACAG-
 C G T A A C T G A G T C A G T C A C G T C G T A A C T G C T G A A T G C C G T A C G T A A C T G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T