Information for 14-GAAAGGGGTCAT (Motif 7)

A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A G T C
p-value:1e-16
log p-value:-3.903e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets109.4 +/- 67.3bp
Average Position of motif in Background106.4 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGGTCAT----
GGCGAGGGGTCAAGGGC
 A C G T A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGGGTCAT----
NTNNNGGGGTCANGNNN
 A C G T A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGGGTCAT----
TNNNNGGTGTCATNTNT
 A C G T A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGGTCAT
TGACAGGTGTCA-
 A C G T A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAAAGGGGTCAT
---AGRGGTCA-
 A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGGTCAT
TGACAGGTGTCA-
 A C G T A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGGTCAT----
CTCCAGGGGTCAATTGA
 A C G T A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

RORB/MA1150.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAAAGGGGTCAT
-AATTAGGTCAC
 A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T
A C G T C G T A G C T A C G A T A C G T C T G A A C T G C T A G A G C T G A T C C T G A G A T C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GAAAGGGGTCAT-
-------GTCATN
 A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

TGIF2/MA0797.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGGTCAT
TGACAGCTGTCA-
 A C G T A C T G C G T A C G T A C G T A A C T G A C T G C T A G C T A G A C G T A G T C C G T A A C G T
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T