Information for 15-CAGTGCAAAGGT (Motif 9)

A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T
Reverse Opposite:
C G T A G A T C A G T C A C G T A G C T A C G T A C T G A G T C C G T A A G T C A C G T A C T G
p-value:1e-14
log p-value:-3.354e+01
Information Content per bp:1.955
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.2 +/- 55.5bp
Average Position of motif in Background67.2 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAGTGCAAAGGT--
VNAGGKCAAAGGTCA
 A C G T A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAGTGCAAAGGT--
TAGGGCAAAGGTCA
 A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGTGCAAAGGT
-ACWTCAAAGG-
 A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGTGCAAAGGT--
AGAGTCCAAAGTCCA
 A C G T A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGTGCAAAGGT--
GTAGGGCAAAGGTCA
 A C G T A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGTGCAAAGGT
-ACATCAAAGG-
 A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGTGCAAAGGT
-ASATCAAAGG-
 A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T
A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGTGCAAAGGT--
GAGGTCAAAGGTCA
 A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGTGCAAAGGT--
TGGGGCAAAGGTCA
 A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAGTGCAAAGGT--
--ANGNAAAGGTCA
 A G T C C G T A A C T G A C G T A C T G A G T C C G T A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A