Information for 4-AGTCATTGAC (Motif 10)

C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C
Reverse Opposite:
A C T G C G A T T A G C G C T A C G T A G A C T A T C G C T G A T A G C G C A T
p-value:1e-12
log p-value:-2.851e+01
Information Content per bp:1.646
Number of Target Sequences with motif151.0
Percentage of Target Sequences with motif9.34%
Number of Background Sequences with motif2445.6
Percentage of Background Sequences with motif5.00%
Average Position of motif in Targets94.7 +/- 57.3bp
Average Position of motif in Background98.9 +/- 65.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATTGAC
NAGGTCATTGA-
 A C G T A C G T C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T

NR1A4::RXRA/MA1146.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGTCATTGAC---
GAGGTCATTGACCTT
 A C G T A C G T C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A G T C C T G A G C A T A G C T T C A G T G C A G T A C G T A C A G C T A G C T

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGTCATTGAC---
GAGGTCATTGACCCC
 A C G T A C G T C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A G C T A G T C T C G A C G A T A G C T T A C G T G C A G T A C G T A C A G T C A G T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATTGAC---
NNCATTCATTCATNNN
 A C G T A C G T A C G T C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGTCATTGAC---
AGGTCANTGACCTN
 A C G T C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C A C G T A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATTGAC----
NAAANTTATTGAANCAN
 A C G T A C G T A C G T C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGTCATTGAC-
---TATTGAYY
 C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C A C G T
A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

PBX2/MA1113.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTCATTGAC---
-GTGATTGACAGG
 C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C A C G T A C G T A C G T
A C G T T C A G C G A T C A T G C T G A A C G T C A G T A C T G C T G A A G T C C T G A A T C G T A C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTCATTGAC
-GTCATN---
 C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTCATTGAC---
GGAGGTCATTAATTAT
 A C G T A C G T A C G T C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T