Information for 2-GCAAAAGG (Motif 14)

A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G
Reverse Opposite:
T G A C T G A C A G C T G A C T C A G T A C G T A T C G T G A C
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.791
Number of Target Sequences with motif215.0
Percentage of Target Sequences with motif13.30%
Number of Background Sequences with motif4063.4
Percentage of Background Sequences with motif8.31%
Average Position of motif in Targets102.4 +/- 56.6bp
Average Position of motif in Background101.5 +/- 61.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAGG---
ATGCAACAGGTGG
 A C G T A C G T A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCAAAAGG--
GCAACAGGTG
 A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G A C G T A C G T
A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAGG-----
GAGCAACAGGTGGTT
 A C G T A C G T A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAGG
TGGAAAA--
 A C G T A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCAAAAGG--
NNATAAGGNN
 A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G A C G T A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAGG--
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCAAAAGG
NATGGAAAAN-
 A C G T A C G T A C G T A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAAAAGG----
AAGGTCAAAAGGTCAA
 A C G T A C G T A C G T A C G T A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAAAAGG---
VNAGGKCAAAGGTCA
 A C G T A C G T A C G T A C G T A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

NR4A1/MA1112.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAAAAGG----
--AAAAGGTCAC
 A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G T A G T C A A T C G T C A G A G C T G T A C C T G A G T A C