Information for 11-AACTAGCAACAT (Motif 15)

C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T
Reverse Opposite:
G C T A A C G T A T C G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.503e+01
Information Content per bp:1.877
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets91.2 +/- 43.7bp
Average Position of motif in Background86.4 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AACTAGCAACAT
SCCTAGCAACAG
 C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACTAGCAACAT-
CCGCATAGCAACGGA
 A C G T A C G T C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AACTAGCAACAT-
---TTGCAACATN
 C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AACTAGCAACAT
TGTTKCCTAGCAACM-
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AACTAGCAACAT-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACTAGCAACAT-
TACCATAGCAACGGT
 A C G T A C G T C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AACTAGCAACAT
GTTAACTAGN-----
 A C G T A C G T A C G T C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACTAGCAACAT---
AACAAACAACAAGAG
 C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACTAGCAACAT
TTAATTAG------
 A C G T A C G T C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AACTAGCAACAT
GANGTTAACTAGTTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T