Information for 12-CGGCAAATATCA (Motif 19)

T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G A T C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.294e+01
Information Content per bp:1.908
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets92.8 +/- 38.1bp
Average Position of motif in Background126.7 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGGCAAATATCA
WAAGTAAAYA---
 A C G T T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGCAAATATCA
ANGNAAAGGTCA
 T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGCAAATATCA
TAGGGCAAAGGTCA
 A C G T A C G T T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGCAAATATCA-----
--AAAAATAACAAACGG
 T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAAATATCA
TGGGGCAAAGGTCA
 A C G T A C G T T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGGCAAATATCA----
GACAGAGATATCAGTGT
 A C G T T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGCAAATATCA
AAGGCAAGTGT--
 A C G T T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGGCAAATATCA
ATATGCAAAT----
 A C G T A C G T T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGCAAATATCA
VNAGGKCAAAGGTCA
 A C G T A C G T A C G T T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGCAAATATCA-----
--TNGAATTTCATTNAN
 T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A