Information for 13-CTATGTGAATGC (Motif 20)

A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C T G
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.945
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.9 +/- 50.5bp
Average Position of motif in Background127.9 +/- 46.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTATGTGAATGC
-TATGCAAAT--
 A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTATGTGAATGC----
NTTNTATGAATGTGNNC
 A C G T A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTATGTGAATGC
-TATGCAAAT--
 A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTATGTGAATGC-
-TATGCWAATBAV
 A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTATGTGAATGC
AATATGCAAATT-
 A C G T A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTATGTGAATGC
-TATGTAAATAT
 A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTATGTGAATGC
TTATGCAAATTA
 A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTATGTGAATGC
TTATGCAAATTA
 A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTATGTGAATGC-
-WATGCAAATGAG
 A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C A C G T
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTATGTGAATGC--
TTGTATGCAAATTAGA
 A C G T A C G T A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A