Information for 10-GGGACGTTCA (Motif 22)

A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A T C G A A T G C A T C G A C G T T A G C A G T C A T G C
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif57.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets78.8 +/- 55.6bp
Average Position of motif in Background97.5 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGACGTTCA-
-GTACGTGCCC
 A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A A C G T
A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGACGTTCA
NCGCGGACGTTG-
 A C G T A C G T A C G T A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGACGTTCA-
TGGCACGTGCCA
 A C G T A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

Gmeb1/MA0615.1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGGACGTTCA---
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T A C G T A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGGACGTTCA---
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T A C G T A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGACGTTCA
GGGTACGTGC-
 A C G T A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGACGTTCA
BGCACGTA--
 A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

PRDM1/MA0508.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGACGTTCA-
-TCACTTTCAC
 A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A A C G T
A C G T G C A T G A T C T C G A G A T C C A G T C G A T G C A T T G A C G C T A G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGACGTTCA
-GGACGTGC-
 A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGGACGTTCA
GGGAATTTCC
 A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C