Information for 4-CAATCGGT (Motif 27)

A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T
Reverse Opposite:
G T C A G A T C G T A C A T C G G C T A G A C T A C G T C T A G
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.592
Number of Target Sequences with motif277.0
Percentage of Target Sequences with motif17.14%
Number of Background Sequences with motif5829.1
Percentage of Background Sequences with motif11.92%
Average Position of motif in Targets104.0 +/- 58.6bp
Average Position of motif in Background100.1 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CAATCGGT
AGCCAATCGG-
 A C G T A C G T A C G T A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAATCGGT
CTAATCGNT
 A C G T A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CAATCGGT--
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------CAATCGGT
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

NFYA/MA0060.3/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAATCGGT
AACCAATCAGA
 A C G T A C G T A C G T A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAATCGGT--
TAATCGATAA
 A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T A C G T A C G T
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAATCGGT--
TAATCGATAA
 A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T A C G T A C G T
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAATCGGT
CCAATCAA-
 A C G T A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAATCGGT
GAACAATGG--
 A C G T A C G T A C G T A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAATCGGT--
AAACCGGTTT
 A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T A C G T A C G T
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T