Information for 17-TTATTGGTGMKT (Motif 28)

A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C G T C G T A C G T A
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.7 +/- 43.2bp
Average Position of motif in Background116.3 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGGTGMKT
NTTTTATTGG-----
 A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGGTGMKT
TTTTTATTGG-----
 A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTATTGGTGMKT--
CTGATTGGTCNATTT
 A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTATTGGTGMKT
NCTGATTGGNN---
 A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTATTGGTGMKT
TTTTATKRGG----
 A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGGTGMKT
NTTTTATTGG-----
 A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTATTGGTGMKT
NNAATTTTATTGGNTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGGTGMKT--
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PH0107.1_Msx2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTGGTGMKT
ANCGCTAATTGGTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TTATTGGTGMKT
NNANTTTTATTGGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T