Information for 2-GGTTAAAATS (Motif 3)

A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C
Reverse Opposite:
A T C G C G T A C A G T A G C T A G C T A C G T G T C A C T G A A T G C T G A C
p-value:1e-15
log p-value:-3.633e+01
Information Content per bp:1.689
Number of Target Sequences with motif162.0
Percentage of Target Sequences with motif10.02%
Number of Background Sequences with motif2448.8
Percentage of Background Sequences with motif5.01%
Average Position of motif in Targets110.7 +/- 54.2bp
Average Position of motif in Background101.6 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.65
Offset:-9
Orientation:reverse strand
Alignment:---------GGTTAAAATS
NMMNBAAAGGGTTAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGTTAAAATS---
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T A C G T A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTTAAAATS--
GCTAAAAATAGC
 A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGTTAAAATS---
ATGCTAAAAATAGAA
 A C G T A C G T A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTTAAAATS--
DCYAAAAATAGM
 A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGTTAAAATS-
-CCAAAAATAG
 A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAAAATS
NTAATTAATAT-
 A C G T A C G T A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGTTAAAATS-
ARGAGGMCAAAATGW
 A C G T A C G T A C G T A C G T A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGTTAAAATS-
-GCTAATTGCT
 A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C A C G T
A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTTAAAATS--
KCCAAAAATAGC
 A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C