Information for 21-GTCACCAGTCAC (Motif 39)

A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A G T C C G A T C A T G A C T G A C G T C A T G C G T A A G T C
p-value:1e-7
log p-value:-1.643e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.7 +/- 39.3bp
Average Position of motif in Background156.4 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTCACCAGTCAC
TGACACCTGTCA-
 A C G T A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCACCAGTCAC
TGACACCTGTCA-
 A C G T A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTCACCAGTCAC
TGACAGCTGTCA-
 A C G T A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCACCAGTCAC
TGACAGCTGTCA-
 A C G T A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCACCAGTCAC---
AAAGACCTGTCAATCC
 A C G T A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCACCAGTCAC
GTCACATGAY--
 A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCACCAGTCAC---
GTCWGCTGTYYCTCT
 A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCACCAGTCAC---
AAGCACCTGTCAATAT
 A C G T A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCACCAGTCAC---
AAAGACCTGTCAATAC
 A C G T A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCACCAGTCAC---
AATTACCTGTCAATAC
 A C G T A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C