Information for 12-GATTAGGT (Motif 42)

A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
Reverse Opposite:
C T G A A G T C A T G C A C G T C G T A C T G A A C G T A G T C
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.895
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif528.3
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets106.8 +/- 53.6bp
Average Position of motif in Background98.8 +/- 64.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC2/MA0891.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGGT
GNGGATTAGN-
 A C G T A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

DUXA/MA0884.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGGT---
NTGATTAAATTAN
 A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T A C G T A C G T A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGGT
NNGGATTAGN-
 A C G T A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GATTAGGT
RGGATTAR--
 A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.73
Offset:-7
Orientation:forward strand
Alignment:-------GATTAGGT
TTGCCCGGATTAGG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GATTAGGT
GGATTAGC-
 A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGGT
CGGATTAN--
 A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGGT----
NWTGATTRGRTTAWN
 A C G T A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T A C G T A C G T A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGGT
GGGATTANN-
 A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGGT
NGGATTAA--
 A C G T A C G T A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T