Information for 13-CCTACAGC (Motif 44)

A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T C G T A A C T G C T A G
p-value:1e-5
log p-value:-1.205e+01
Information Content per bp:1.958
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif471.3
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets102.8 +/- 62.0bp
Average Position of motif in Background103.1 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCTACAGC
--CACAGN
 A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCTACAGC-----
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCTACAGC-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCTACAGC-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCTACAGC-
----CAGCC
 A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCTACAGC-----
---ACAGCTGTTV
 A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTACAGC--
--AACAGCTG
 A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCTACAGC-----
---HCAGCTGDTN
 A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCTACAGC-----
---NCAGCTGCTG
 A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCTACAGC---
-NAACAGCTGG
 A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G