Information for 23-GCAGTATAAT (Motif 45)

A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.166e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets118.8 +/- 49.1bp
Average Position of motif in Background86.2 +/- 51.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCAGTATAAT----
TATAATTATAATATTC
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTATAAT----
NCGTATTATAATCNTA
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCAGTATAAT----
TTTAATTATAATTAAG
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCAGTATAAT----
GCTAATTATAATTATC
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PH0022.1_Dlx3/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGTATAAT-------
TCGCGATAATTACCGAC
 A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PH0023.1_Dlx4/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGTATAAT-------
GCGCTATAATTACCGAC
 A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCAGTATAAT----
----NTTAATTAGN
 A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCAGTATAAT---
-----NTAATTGN
 A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCAGTATAAT---
-----NTAATTGG
 A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

NKX6-2/MA0675.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCAGTATAAT---
-----TTAATTAN
 A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G