Information for 11-TGCATAGTTTTC (Motif 14)

A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
Reverse Opposite:
C T A G C T G A C G T A C G T A C G T A G T A C A C G T C G T A C G A T A C T G G T A C C G T A
p-value:1e-6
log p-value:-1.421e+01
Information Content per bp:1.811
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif159.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets139.2 +/- 27.1bp
Average Position of motif in Background99.0 +/- 57.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATAGTTTTC
TNNATTATGCATANNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGCATAGTTTTC
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGTTTTC
ATGAATATTC---
 A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGTTTTC
ATGMATATDC---
 A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCATAGTTTTC
TGCTGTGATTT-
 A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGCATAGTTTTC
GATTTGCATA------
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGCATAGTTTTC---
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCATAGTTTTC
-GCAGTGATTT-
 A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGTTTTC-
ATGAATAATTAATG
 A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

SOX8/MA0868.1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGCATAGTTTTC
AACACTGCACATTGTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G C G A T A C G T A C G T A G C T A G T C
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T A C G T