Information for 5-AATTGAGT (Motif 17)

C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-9.399e+00
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.57%
Number of Background Sequences with motif497.5
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets96.3 +/- 41.7bp
Average Position of motif in Background101.4 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AATTGAGT-
TAATTGATTA
 A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AATTGAGT
TATTGAYY
 C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AATTGAGT---
-ATTGATTYND
 C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AATTGAGT----
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATTGAGT--
TAATTAAATTA
 A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATTGAGT--
TAATTAAATTA
 A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

MSX1/MA0666.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AATTGAGT
NTAATTGG--
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATTGAGT----
-CTTGAGTGGCT
 C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Msx3/MA0709.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AATTGAGT
NTAATTGN--
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T

UNCX/MA0721.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AATTGAGT
NTAATTAN--
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T A C G T