Information for 2-GGAGGCAAGA (Motif 4)

C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A
Reverse Opposite:
A C G T A T G C G C A T A C G T C A T G T A G C G T A C G A C T G T A C G T A C
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.697
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif16.89%
Number of Background Sequences with motif2329.2
Percentage of Background Sequences with motif4.67%
Average Position of motif in Targets91.6 +/- 57.7bp
Average Position of motif in Background101.7 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGAGGCAAGA--
-AAGGCAAGTGT
 C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCAAGA
GGGCGGGAAGG
 A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCAAGA
VGCTGGCA---
 A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGAGGCAAGA-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

ATF4/MA0833.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAGGCAAGA
GGATGATGCAATA
 A C G T A C G T A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------GGAGGCAAGA
CTCCCTGGGAGGCCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGGCAAGA--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGAGGCAAGA--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCAAGA----
ARGAGGMCAAAATGW
 A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A A C G T A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGAGGCAAGA
NATGTTGCAA--
 A C G T A C G T C A T G A C T G C T G A C A T G A T C G G T A C G T C A C G T A T A C G T G C A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T