Information for 3-CATGGWGTSTWG (Motif 5)

A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A C G T A A T C G C T G A A G T C C G A T A G T C A G T C C G T A A G C T A C T G
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.865
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets127.7 +/- 49.7bp
Average Position of motif in Background105.0 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CATGGWGTSTWG
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CATGGWGTSTWG
-ATGGGGTGAT-
 A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CATGGWGTSTWG
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CATGGWGTSTWG
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CATGGWGTSTWG-
-----TGTCTAGA
 A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

KLF4/MA0039.3/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CATGGWGTSTWG
NNAGGGTGTGG--
 A C G T A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
C T A G T A G C C G T A C T A G A C T G T C A G G A C T C A T G A G C T A C T G A C T G A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CATGGWGTSTWG
TAAGGCGTCTTG
 A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CATGGWGTSTWG--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CATGGWGTSTWG
GRTGMTRGAGCC---
 A C G T A C G T A C G T A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CATGGWGTSTWG
-ATGGGGTGAT-
 A G T C C T G A A C G T A C T G A C T G C G T A A C T G A G C T A T G C A C G T C G A T A C T G
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T