Information for 1-GCTGCCTTCTTC (Motif 3)

A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C
Reverse Opposite:
C A T G G T C A C G T A A C T G C G T A T C G A A C T G A C T G A G T C C G T A A C T G A G T C
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.726
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif12.90%
Number of Background Sequences with motif907.5
Percentage of Background Sequences with motif1.81%
Average Position of motif in Targets90.6 +/- 54.5bp
Average Position of motif in Background99.4 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTGCCTTCTTC
GCCGCCATCTTG
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTGCCTTCTTC
GCNGCCATCTTG
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTGCCTTCTTC----
-CTGCCWVCTTTTRTA
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C A C G T A C G T A C G T A C G T
A C G T A G T C G A C T A C T G G A T C G T A C C G T A T G A C A G T C C G A T A G C T A C G T A C G T C T A G G A C T C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCTGCCTTCTTC
----GCTTCC--
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTGCCTTCTTC
TAAGGCGTCTTG
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

CTCFL/MA1102.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTGCCTTCTTC--
NGTGCCCCCTGGNG
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C A C G T A C G T
T C A G T A C G A G C T C A T G T G A C A T G C T G A C A G T C A T G C A C G T T C A G A T C G A G C T A T C G

NEUROD1/MA1109.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTGCCTTCTTC--
-NNNCCATCTGTNN
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C A C G T A C G T
A C G T A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTGCCTTCTTC
-TTGACTTTT--
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

BATF3/MA0835.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCTTCTTC-
TGATGACGTCATCA
 A C G T A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C A C G T
G A C T C A T G T C G A C G A T C A T G G T C A A G T C A C T G A C G T A G T C C G T A A G C T G A T C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCTGCCTTCTTC-
---GCCATCTGTT
 A C T G G T A C C G A T C T A G T A G C A G T C A G C T C G A T A G T C A C G T A C G T G A T C A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T