Information for 20-AAGGACCTGGAA (Motif 18)

C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.205e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background118.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAGGACCTGGAA
-ATGACCTTGAA
 C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGGACCTGGAA-------
GAAGTANCACGAATNMRAGT
 A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAGGACCTGGAA
NATGACCTTGA-
 C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGGACCTGGAA
TCAATGACCTA---
 A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAGGACCTGGAA--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0011.1_Ehf_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGGACCTGGAA----
-AGGACCCGGAAGTAA
 C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAGGACCTGGAA---
-----CCWGGAATGY
 C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

ELF5/MA0136.2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAGGACCTGGAA---
----ACCCGGAAGTA
 C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAGGACCTGGAA
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAGGACCTGGAA
--TGACCTTGAN
 C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A C G T A
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A