Information for 19-GGGGTCAATC (Motif 23)

A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G C G T A A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.512e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets16.0 +/- 0.0bp
Average Position of motif in Background85.3 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAATC--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAATC--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGTCAATC--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGGGTCAATC
AGRGGTCA---
 A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAATC-
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAATC-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAATC
NRBCARRGGTCA---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGGGTCAATC
-AGGTCA---
 A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GGGGTCAATC
--RRTCAATA
 A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C
A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGTCAATC-----
GAAGATCAATCACTAA
 A C G T A C T G A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A