Information for 5-AATGTGTTTTTC (Motif 5)

C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C T G A C G T A C T G A A G T C C G T A A G T C C G T A A G C T A C G T
p-value:1e-20
log p-value:-4.722e+01
Information Content per bp:1.937
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif75.00%
Number of Background Sequences with motif127.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets106.8 +/- 53.7bp
Average Position of motif in Background119.5 +/- 121.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AATGTGTTTTTC
GAATGTTTGTTT-
 A C G T C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AATGTGTTTTTC
NNTGTGGTTT--
 C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AATGTGTTTTTC-
--TGTGGATTNNN
 C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATGTGTTTTTC----
NNNNTTTTTTTTTNAAC
 A C G T C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AATGTGTTTTTC
NNTGTGGATTSS
 C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATGTGTTTTTC
-CTGTGGTTTN-
 C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AATGTGTTTTTC
NNHTGTGGTTWN-
 A C G T C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATGTGTTTTTC
GTCTGTGGTTT--
 A C G T C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AATGTGTTTTTC
GCTGTGGTTT--
 C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

TEAD2/MA1121.1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AATGTGTTTTTC
GNNTGGAATGTGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T A C T G A C G T A C T G A G C T C G A T A G C T A C G T A C G T A G T C
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T A C G T A C G T A C G T A C G T