Information for 6-CATTTTTCAMGT (Motif 6)

A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
Reverse Opposite:
C G T A G T A C A C G T A C G T A C T G C G T A C T G A C G T A C G T A C G T A A C G T A C T G
p-value:1e-19
log p-value:-4.476e+01
Information Content per bp:1.877
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif75.00%
Number of Background Sequences with motif167.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets94.8 +/- 57.7bp
Average Position of motif in Background105.9 +/- 129.1bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATTTTTCAMGT
TCATCAATCA---
 A C G T A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATTTTTCAMGT-
TTTTTTTTCNNGTN
 A C G T A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATTTTTCAMGT
RGCCATYAATCA---
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATTTTTCAMGT------
-NANTTTCAAGTGGTTAN
 A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATTTTTCAMGT
-ATTTTCCATT-
 A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTTTCAMGT
ANNTCCATTGTTCNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CATTTTTCAMGT
NNCCATTGTNN----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CATTTTTCAMGT
NCCATTGTTC----
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTTTCAMGT
CCTTGCAATTTTTNN--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CATTTTTCAMGT
--TTTCACACCT
 A G T C C G T A A C G T A C G T A C G T A G C T A C G T G T A C C G T A G T C A A C T G A C G T
A C G T A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T