Information for 8-CRTGATTTTCAG (Motif 8)

A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G G T C A C G T A C T G A C G T A C G A T A G T C G T C A G A C T A C T G
p-value:1e-17
log p-value:-3.957e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif144.4
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets67.0 +/- 38.6bp
Average Position of motif in Background85.7 +/- 119.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9/MA0485.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CRTGATTTTCAG--
-NTGATTTATGGCC
 A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CRTGATTTTCAG-
-NTGATTGACAGN
 A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX2/MA1113.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CRTGATTTTCAG-
-GTGATTGACAGG
 A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T T C A G C G A T C A T G C T G A A C G T C A G T A C T G C T G A A G T C C T G A A T C G T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CRTGATTTTCAG
CNGTGATTTN---
 A C G T A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CRTGATTTTCAG--
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CRTGATTTTCAG-
---GATTTGCATA
 A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CRTGATTTTCAG--
--TGATTTATGGCC
 A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:8
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CRTGATTTTCAG
YCCDNTCCAGGTTTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CRTGATTTTCAG--
-TTCATTTGCATAT
 A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CRTGATTTTCAG-
-BTGABTGACAGS
 A G T C C T G A A C G T A C T G C G T A A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C