Information for 9-GGTGASAGTCTC (Motif 10)

A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G G T C A G T A C A C G T A T C G G A C T A G T C G T C A A T G C A G T C
p-value:1e-6
log p-value:-1.478e+01
Information Content per bp:1.797
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif445.3
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets101.9 +/- 45.7bp
Average Position of motif in Background98.2 +/- 68.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTGASAGTCTC
AGGTGNCAGACAG
 A C G T A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTGASAGTCTC
AGGTGHCAGACA-
 A C G T A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTGASAGTCTC
GGTGYTGACAGS---
 A C G T A C G T A C G T A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTGASAGTCTC
AGGTGTCA-----
 A C G T A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGTGASAGTCTC
VBTGWCAGCB--
 A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGTGASAGTCTC
DAGGTGTBAA----
 A C G T A C G T A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTGASAGTCTC
AGGTGTGA-----
 A C G T A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTGASAGTCTC
ARNTGACA-----
 A C G T A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTGASAGTCTC
AGGTGTTAAT---
 A C G T A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTGASAGTCTC
RHTGWCAR----
 A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T