Information for 7-GTCAAGGGTATA (Motif 6)

A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
Reverse Opposite:
A G C T C G T A A C G T G T C A A G T C G T A C A G T C A C G T A C G T A C T G C G T A A G T C
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets67.2 +/- 28.1bp
Average Position of motif in Background101.5 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGGGTATA
AGGTCAAGGTCA--
 A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGGGTATA
AGGTCAAGGTCA--
 A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCAAGGGTATA
TTCAAGGTCAT-
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTCAAGGGTATA--
---AAGGATATNTN
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCAAGGGTATA
-TCAAGGTCATA
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCAAGGGTATA
BTCAAGGTCA--
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCAAGGGTATA
NTCAAGGTCA--
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCAAGGGTATA
NBYCAAGGTCAC-
 A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTCAAGGGTATA
-TCAAGGTCAT-
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGGGTATA---
TATTCAAGGTCATGCGA
 A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A