Information for 9-AGAGTTGGGA (Motif 15)

C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A
Reverse Opposite:
G C A T A G T C A G T C A G T C C G T A C T G A T A G C C G A T A G T C A C G T
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.871
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif8.93%
Number of Background Sequences with motif254.3
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets122.6 +/- 43.3bp
Average Position of motif in Background96.7 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGAGTTGGGA---
---CCTGGGAAAG
 C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGAGTTGGGA-
--GGTTGGCAT
 C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGAGTTGGGA---
---CSTGGGAAAD
 C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGAGTTGGGA--
--NNTTGGCANN
 C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGAGTTGGGA---
NATNGGGNGGGGANAN
 A C G T A C G T A C G T C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGAGTTGGGA--
---NTTGGCANN
 C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTTGGGA
NNCAGTTGNN-
 A C G T C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGAGTTGGGA-
TAYAAAAGBWGGCAG
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A A C G T
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGAGTTGGGA
----TGGGGA
 C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGTTGGGA------
AGAGCGGGGTCAAGTA
 C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A