Information for 3-TGGGAGGC (Motif 21)

G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C
Reverse Opposite:
T A C G T G A C A G T C C G A T A G T C G T A C T G A C C G T A
p-value:1e-6
log p-value:-1.538e+01
Information Content per bp:1.789
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif24.11%
Number of Background Sequences with motif3905.6
Percentage of Background Sequences with motif8.07%
Average Position of motif in Targets111.0 +/- 50.8bp
Average Position of motif in Background99.5 +/- 60.5bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:1
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----TGGGAGGC--
CTCCCTGGGAGGCCN
 A C G T A C G T A C G T A C G T A C G T G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:2
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGAGGC
VTGYGKGGGAGK-
 A C G T A C G T A C G T A C G T A C G T G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGGGAGGC---
-GGGAGGACNG
 G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C A C G T A C G T A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGGGAGGC--
HAWGRGGCCM
 G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C A C G T A C G T
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGGGAGGC
NGCGTGGGCGGR
 A C G T A C G T A C G T A C G T G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGGGAGGC--
YSTGGGTGGTCT
 A C G T A C G T G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C A C G T A C G T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TGGGAGGC-----
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGGGAGGC
-CGGAGC-
 G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAGGC-
GTGGGGGGGG
 A C G T G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C A C G T
C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGGGAGGC--
GGGGNGGGGC
 G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C A C G T A C G T
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C