Information for 19-GCTTTAACTA (Motif 22)

A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C T G A G T C
p-value:1e-5
log p-value:-1.313e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets74.7 +/- 33.1bp
Average Position of motif in Background90.7 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCTTTAACTA--
--GTTAACTAGN
 A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCTTTAACTA-----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTAACTA------
GANGTTAACTAGTTTNN
 A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCTTTAACTA----
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0011.1_Alx1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCTTTAACTA------
CGCATTAATTAATTGGC
 A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

Alx4/MA0853.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCTTTAACTA------
CGCATTAATTAATTACC
 A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C A T C G G A T C C T G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G C T G C A T G T C A A T G C A G T C

PH0002.1_Alx4/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCTTTAACTA------
CGCATTAATTAATTACC
 A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C A T C G G A T C C T G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G C T G C A T G T C A A T G C A G T C

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCTTTAACTA----
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCTTTAACTA-
---TTAATTAG
 A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T
A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

Alx1/MA0854.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCTTTAACTA------
CGAATTAATTAATCACC
 A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T C G G T C A C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T G A T C G T C A G A T C G A T C