Information for 20-AAACAGACAG (Motif 23)

C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G A C G T A G T C C G A T C T A G C G A T A G C T A G C T
p-value:1e-5
log p-value:-1.311e+01
Information Content per bp:1.851
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif10.71%
Number of Background Sequences with motif936.2
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets106.2 +/- 58.8bp
Average Position of motif in Background99.9 +/- 69.6bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AAACAGACAG
--CCAGACAG
 C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AAACAGACAG--
--CCAGACRSVB
 C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAACAGACAG--
RHHCAGAGAGGB
 C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAACAGACAG----
CAAATCCAGACATCACA
 A C G T A C G T A C G T C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AAACAGACAG
--BCAGACWA
 C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAACAGACAG---
AGCAACAGCCGCACC
 A C G T A C G T C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAACAGACAG
GTAAACAG----
 A C G T A C G T C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAACAGACAG
AAGTAAACAAA---
 A C G T A C G T A C G T A C G T C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAACAGACAG-
GAAAGTGAAAGT
 A C G T C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

FOXP1/MA0481.2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAACAGACAG
AAGTAAACAGAA--
 A C G T A C G T A C G T A C G T C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G
T C G A C G T A C T A G G A C T T G C A G T C A C T G A G A T C C G T A T C A G C G T A G C T A A C G T A C G T