Information for 6-YCTTAGGT (Motif 26)

A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T C G T A C G T A A C T G C T A G
p-value:1e-4
log p-value:-1.047e+01
Information Content per bp:1.845
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif5369.9
Percentage of Background Sequences with motif11.10%
Average Position of motif in Targets106.6 +/- 55.6bp
Average Position of motif in Background101.1 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--YCTTAGGT-------
NTNNTTAAGTGGNTNAN
 A C G T A C G T A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

GATA6/MA1104.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--YCTTAGGT---
NNTCTTATCTNNN
 A C G T A C G T A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T A C G T
G C A T G C A T A G C T A T G C G C A T G C A T G C T A G A C T A G T C C G A T A G C T G C A T G C A T

Znf423/MA0116.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----YCTTAGGT---
GCACCCCTGGGTGCC
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:YCTTAGGT---
--TTAAGTGGN
 A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-YCTTAGGT--
TTCTTATCTGT
 A C G T A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

GMEB2/MA0862.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:YCTTAGGT--
--TTACGTAA
 A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

SIX1/MA1118.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YCTTAGGT---
TATCAGGTTAC
 A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T A C G T
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YCTTAGGT---
--TTAAGTGGT
 A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YCTTAGGT-------
NTNNTTAAGTGGTTANN
 A C G T A C G T A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NFIL3/MA0025.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:YCTTAGGT-----
--TTATGTAACAT
 A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T